A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16481345



Internal ID19344905
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:12910261..12910261hg38UCSC Ensembl
chr17:12813578..12813578hg19UCSC Ensembl
Cytoband17p12
Allele length
AssemblyAllele length
hg3878
hg1978
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3657935
Supporting Variants
Samples
Known GenesARHGAP44
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16481345
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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