A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16477900



Internal ID19341460
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:82761967..82761967hg38UCSC Ensembl
chr12:83155746..83155746hg19UCSC Ensembl
Cytoband12q21.31
Allele length
AssemblyAllele length
hg3857
hg1957
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3654106
Supporting Variants
Samples
Known GenesTMTC2
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16477900
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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