A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16477339



Internal ID18994213
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:7471584..7471584hg38UCSC Ensembl
chr12:7624180..7624180hg19UCSC Ensembl
Cytoband12p13.31
Allele length
AssemblyAllele length
hg3873
hg1973
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3653484
Supporting Variants
Samples
Known GenesCD163
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16477339
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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