A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16475748



Internal ID19339308
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:63247719..63247719hg38UCSC Ensembl
chr10:65007479..65007479hg19UCSC Ensembl
Cytoband10q21.3
Allele length
AssemblyAllele length
hg3870
hg1970
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3651716
Supporting Variants
Samples
Known GenesJMJD1C
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16475748
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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