A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16474974



Internal ID18991848
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:122389422..122389422hg38UCSC Ensembl
chr9:125151701..125151701hg19UCSC Ensembl
Cytoband9q33.2
Allele length
AssemblyAllele length
hg3857
hg1957
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3650856
Supporting Variants
Samples
Known GenesPTGS1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16474974
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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