A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16470235



Internal ID18987109
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:77299296..77299296hg38UCSC Ensembl
chr1:77764981..77764981hg19UCSC Ensembl
Cytoband1p31.1
Allele length
AssemblyAllele length
hg38312
hg19312
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3685731
Supporting Variants
Samples
Known GenesAK5
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16470235
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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