A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16470176



Internal ID18987050
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:138294194..138294194hg38UCSC Ensembl
chr5:137629883..137629883hg19UCSC Ensembl
Cytoband5q31.2
Allele length
AssemblyAllele length
hg3886
hg1986
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3685665
Supporting Variants
Samples
Known GenesCDC25C
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16470176
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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