A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16468333



Internal ID19331893
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:194202658..194202717hg38UCSC Ensembl
chr3:193920447..193920506hg19UCSC Ensembl
Cytoband3q29
Allele length
AssemblyAllele length
hg3860
hg1960
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3683619
Supporting Variants
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16468333
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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