A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16467089



Internal ID19330649
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:21333241..21333472hg38UCSC Ensembl
chrY:23495127..23495358hg19UCSC Ensembl
CytobandYq11.223
Allele length
AssemblyAllele length
hg38232
hg19232
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3679973
Supporting Variants
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16467089
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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