A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16465603



Internal ID19329163
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr20:33686062..33686146hg38UCSC Ensembl
chr20:32273868..32273952hg19UCSC Ensembl
Cytoband20q11.22
Allele length
AssemblyAllele length
hg3885
hg1985
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3663464
Supporting Variants
Samples
Known GenesE2F1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16465603
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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