A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16463356



Internal ID19326916
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:79036782..79036849hg38UCSC Ensembl
chr15:79329124..79329191hg19UCSC Ensembl
Cytoband15q25.1
Allele length
AssemblyAllele length
hg3868
hg1968
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3684137
Supporting Variants
Samples
Known GenesRASGRF1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16463356
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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