A curated catalogue of human genomic structural variation




Variant Details

Variant: essv12739



Internal ID9610046
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr20:63583375..63745014hg38UCSC Ensembl
Innerchr20:62214728..62376367hg19UCSC Ensembl
Innerchr20:61685172..61846811hg18UCSC Ensembl
Innerchr20:61685172..61846811hg17UCSC Ensembl
Cytoband20q13.33
Allele length
AssemblyAllele length
hg38161640
hg19161640
hg18161640
hg17161640
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2758526
Supporting Variants
SamplesNA18914
Known GenesARFRP1, GMEB2, LIME1, RTEL1, RTEL1-TNFRSF6B, SLC2A4RG, STMN3, TNFRSF6B, ZBTB46, ZGPAT
MethodBAC aCGH
AnalysisArray images were acquired using an Agilent laser scanner (Agilent Technologies, UK). Fluorescence intensities and log2 ratio values were extracted using Bluefuse software (Bluegnome Ltd).
PlatformAgilent
Comments
ReferenceRedon_et_al_2006
Pubmed ID17122850
Accession Number(s)essv12739
Frequency
Sample Size270
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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