A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv9e201



Internal ID22759367
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:16036069..16062660hg38UCSC Ensembl
chr1:16362564..16389155hg19UCSC Ensembl
Cytoband1p36.13
Allele length
AssemblyAllele length
hg3826592
hg1926592
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2741171, esv2742398, esv2742158, esv2742186, esv2741778, esv2743158, esv2740827, esv2741532, esv2742676, esv2743310, esv2741741, esv2742502, esv2741349, esv2741855, esv2741777, esv2742048, esv2741629, esv2741927, esv2741203, esv2742397, esv2742214, esv2742677, esv2742830, esv2742785, esv2741456, esv2740810, esv2742087, esv2742786, esv2742525, esv2742988, esv2743035, esv2741822, esv2740860, esv2741556, esv2742828, esv2742578, esv2741950, esv2743253, esv2742487, esv2741507, esv2743159, esv2742704, esv2741432, esv2741275, esv2742215, esv2742477, esv2742049, esv2740758, esv2742460, esv2741739, esv2742308, esv2742913, esv2744375, esv2742425, esv2741557, esv2741665, esv2741348, esv2742282, esv2743116, esv2742008, esv2742741, esv2741582, esv2741854, esv2743157, esv2742120, esv2740760, esv2741083, esv2742030, esv2741082, esv2742462, esv2741427, esv2741168, esv2741126, esv2741630, esv2742579, esv2742867, esv2742822, esv2741302, esv2742378, esv2742488, esv2742086, esv2742050, esv2740964, esv2742742, esv2742027, esv2741590, esv2743160, esv2742283, esv2741204, esv2741410, esv2743311, esv2742424, esv2741581, esv2740952, esv2742344, esv2740828, esv2742603, esv2740915, esv2740981, esv2741605, esv2742987, esv2742343, esv2741533, esv2742285, esv2742868, esv2742947, esv2740950, esv2743060, esv2742478
SamplesSSM100, SSM059, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM045, SSM011, SSM064, SSM079, SSM065, SSM087, SSM038, SSM097, SSM013, SSM009, SSM093, SSM050, SSM074, SSM042, SSM088, SSM002, SSM057, SSM023, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM062, SSM026, SSM089, SSM017, SSM019, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM066, SSM006, SSM085, SSM068, SSM081, SSM082, SSM020, SSM007, SSM015, SSM078, SSM016, SSM053, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM010, SSM091, SSM055, SSM070, SSM025, SSM034, SSM004, SSM043, SSM052, SSM098, SSM049, SSM056, SSM030, SSM063, SSM012
Known GenesCLCNKB, FAM131C
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv9e201
Frequency
Sample Size96
Observed Gain0
Observed Loss84
Observed Complex0
Frequencyn/a


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