Variant DetailsVariant: dgv940n27Internal ID | 20133198 | Landmark | | Location Information | | Cytoband | 9q21.11 | Allele length | Assembly | Allele length | hg38 | 18912 | hg19 | 18912 | hg18 | 18912 | hg17 | 18912 |
| Variant Type | CNV loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nsv466401, nsv466410, nsv466403, nsv466409, nsv466405, nsv466411, nsv466414, nsv466408, nsv466400 | Samples | HGDP00571, HGDP00167, HGDP00815, HGDP00460, 1780862043_A, HGDP00727, HGDP00688, HGDP01294, HGDP00125 | Known Genes | APBA1 | Method | SNP array | Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. | Platform | Not reported | Comments | | Reference | Itsara_et_al_2009 | Pubmed ID | 19166990 | Accession Number(s) | dgv940n27
| Frequency | Sample Size | 1557 | Observed Gain | 0 | Observed Loss | 9 | Observed Complex | 0 | Frequency | n/a |
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