A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv931n27



Internal ID20133189
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:26641559..26691670hg38UCSC Ensembl
chr9:26641557..26691668hg19UCSC Ensembl
chr9:26631557..26681668hg18UCSC Ensembl
chr9:26631557..26681668hg17UCSC Ensembl
Cytoband9p21.2
Allele length
AssemblyAllele length
hg3850112
hg1950112
hg1850112
hg1750112
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv466330, nsv466331
SamplesHGDP01336, HGDP01330
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv931n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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