Variant DetailsVariant: dgv898n27 | Internal ID | 22767627 | | Landmark | | | Location Information | | | Cytoband | 8q24.23 | | Allele length | | Assembly | Allele length | | hg38 | 201391 | | hg19 | 201391 | | hg18 | 201391 | | hg17 | 201391 |
| | Variant Type | CNV loss | | Copy Number | | | Allele State | | | Allele Origin | | | Probe Count | | | Validation Flag | | | Merged Status | M | | Merged Variants | | | Supporting Variants | nsv465874, nsv465858, nsv465842, nsv465836, nsv465849, nsv465926, nsv465857, nsv465845, nsv465835, nsv465844, nsv465843, nsv465870, nsv465924, nsv465871, nsv465830, nsv465918, nsv465920, nsv465854, nsv465882, nsv465863, nsv465865, nsv465867, nsv465855, nsv465846, nsv465864, nsv465869, nsv465847, nsv465856, nsv465851, nsv465866, nsv465862, nsv465873, nsv465868, nsv465917, nsv465880, nsv465860, nsv465881, nsv465848, nsv465853, nsv465919, nsv465837, nsv465859, nsv465840, nsv465841, nsv465852 | | Samples | NINDS_13, 1780862274_A, HGDP00003, 1782681096_A, 1798860361_A, HGDP00892, NINDS_82, 1780862452_A, HGDP00279, 1780854095_A, HGDP00259, 1780854129_A, HGDP00559, HGDP00141, HGDP00072, 1782681217_A, NINDS_14, 1780854455_A, HGDP00150, 1780854334_A, HGDP00144, HGDP00076, 1780862227_A, 1798860594_A, 1780862101_A, NINDS_240, HGDP00518, HGDP01075, 1782681317_A, HGDP00670, HGDP00622, HGDP00037, HGDP01386, 1780862002_A, HGDP00584, HGDP00667, HGDP00025, HGDP00594, HGDP00564, HGDP00155, 1780854566_A, 1780862014_A, NINDS_136, HGDP00330, HGDP00338 | | Known Genes | | | Method | SNP array | | Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. | | Platform | Not reported | | Comments | | | Reference | Itsara_et_al_2009 | | Pubmed ID | 19166990 | | Accession Number(s) | dgv898n27
| | Frequency | | Sample Size | 1557 | | Observed Gain | 0 | | Observed Loss | 45 | | Observed Complex | 0 | | Frequency | n/a |
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