A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv897n27



Internal ID22767626
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:131446702..131566427hg38UCSC Ensembl
chr8:132458949..132578674hg19UCSC Ensembl
chr8:132528131..132647856hg18UCSC Ensembl
chr8:132528131..132647856hg17UCSC Ensembl
Cytoband8q24.22
Allele length
AssemblyAllele length
hg38119726
hg19119726
hg18119726
hg17119726
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv465814, nsv465815
SamplesHGDP01279, HGDP00688
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv897n27
Frequency
Sample Size1557
Observed Gain2
Observed Loss0
Observed Complex0
Frequencyn/a


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