A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv87e201



Internal ID20124974
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:3115064..3115651hg38UCSC Ensembl
chr10:3157256..3157843hg19UCSC Ensembl
Cytoband10p15.2
Allele length
AssemblyAllele length
hg38588
hg19588
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2731217, esv2731251
SamplesSSM036, SSM008, SSM083, SSM075, SSM045, SSM046, SSM073, SSM002, SSM096, SSM089, SSM032, SSM033, SSM040, SSM016, SSM080, SSM095, SSM004, SSM012
Known GenesPFKP
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv87e201
Frequency
Sample Size96
Observed Gain0
Observed Loss18
Observed Complex0
Frequencyn/a


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