A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv848n27



Internal ID22767577
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:154880936..154901904hg38UCSC Ensembl
chr7:154672646..154693614hg19UCSC Ensembl
chr7:154303579..154324547hg18UCSC Ensembl
chr7:154110294..154131262hg17UCSC Ensembl
Cytoband7q36.2
Allele length
AssemblyAllele length
hg3820969
hg1920969
hg1820969
hg1720969
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv465241, nsv465240
SamplesHGDP01163, NINDS_66
Known GenesDPP6
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv848n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer