A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv844n27



Internal ID22767573
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:149759270..149787971hg38UCSC Ensembl
chr7:149456359..149485059hg19UCSC Ensembl
chr7:149087292..149115992hg18UCSC Ensembl
chr7:148894007..148922707hg17UCSC Ensembl
Cytoband7q36.1
Allele length
AssemblyAllele length
hg3828702
hg1928701
hg1828701
hg1728701
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv465203, nsv465204
Samples1782681313_A, HGDP01163
Known GenesSSPO, ZNF467
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv844n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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