A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv841e201



Internal ID20125728
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:55445063..55445272hg38UCSC Ensembl
chr4:56311230..56311439hg19UCSC Ensembl
Cytoband4q12
Allele length
AssemblyAllele length
hg38210
hg19210
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2727636, esv2727634, esv2727635
SamplesSSM100, SSM027, SSM075, SSM011, SSM079, SSM087, SSM097, SSM039, SSM074, SSM042, SSM088, SSM041, SSM018, SSM026, SSM089, SSM032, SSM014, SSM086, SSM081, SSM040, SSM082, SSM078, SSM034
Known GenesCLOCK
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv841e201
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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