A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv826n27



Internal ID22767555
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:90537591..90592034hg38UCSC Ensembl
chr7:90166905..90221348hg19UCSC Ensembl
chr7:90004841..90059284hg18UCSC Ensembl
chr7:89811556..89865999hg17UCSC Ensembl
Cytoband7q21.13
Allele length
AssemblyAllele length
hg3854444
hg1954444
hg1854444
hg1754444
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv464635, nsv464636
SamplesHGDP01198, HGDP00776
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv826n27
Frequency
Sample Size1557
Observed Gain2
Observed Loss0
Observed Complex0
Frequencyn/a


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