A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv802e201



Internal ID20125689
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:1095134..1096452hg38UCSC Ensembl
chr4:1088922..1090240hg19UCSC Ensembl
Cytoband4p16.3
Allele length
AssemblyAllele length
hg381319
hg191319
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2726759, esv2726755, esv2726757
SamplesSSM065, SSM022, SSM027, SSM013, SSM086, SSM055, SSM033, SSM084, SSM025, SSM016, SSM032, SSM067, SSM083, SSM050, SSM097, SSM077, SSM012, SSM017, SSM066, SSM028, SSM002, SSM019, SSM068
Known GenesRNF212
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv802e201
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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