A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv79e201



Internal ID20124966
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:1592279..1593252hg38UCSC Ensembl
chr10:1634474..1635447hg19UCSC Ensembl
Cytoband10p15.3
Allele length
AssemblyAllele length
hg38974
hg19974
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2730217, esv2730306, esv2730284, esv2730328, esv2730262, esv2730239
SamplesSSM065, SSM022, SSM027, SSM013, SSM082, SSM086, SSM036, SSM033, SSM084, SSM099, SSM042, SSM040, SSM043, SSM089, SSM090, SSM031, SSM035, SSM025, SSM072, SSM016, SSM032, SSM039, SSM024, SSM045, SSM067, SSM094, SSM083, SSM097, SSM077, SSM005, SSM093, SSM100, SSM017, SSM011, SSM066, SSM028, SSM029, SSM003, SSM095, SSM047, SSM073, SSM069, SSM021, SSM037, SSM034, SSM038, SSM046, SSM019, SSM096, SSM079, SSM068, SSM044, SSM075, SSM026, SSM014, SSM098, SSM018, SSM076, SSM081, SSM070, SSM080
Known GenesADARB2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv79e201
Frequency
Sample Size96
Observed Gain0
Observed Loss61
Observed Complex0
Frequencyn/a


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