A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv794n27



Internal ID22767523
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:45653..108274hg38UCSC Ensembl
chr7:45653..108274hg19UCSC Ensembl
chr7:140736..203357hg18UCSC Ensembl
chr7:140736..203357hg17UCSC Ensembl
Cytoband7p22.3
Allele length
AssemblyAllele length
hg3862622
hg1962622
hg1862622
hg1762622
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv464241, nsv464234
SamplesHGDP00438, 1780854419_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv794n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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