A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv776n27



Internal ID22767505
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:92390188..92430198hg38UCSC Ensembl
chr6:93099906..93139916hg19UCSC Ensembl
chr6:93156627..93196637hg18UCSC Ensembl
chr6:93156627..93196637hg17UCSC Ensembl
Cytoband6q15
Allele length
AssemblyAllele length
hg3840011
hg1940011
hg1840011
hg1740011
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv463958, nsv463959
Samples1780854495_A, HGDP00948
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv776n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer