A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv776e201



Internal ID22760134
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:98126843..98183478hg38UCSC Ensembl
chr3:97845687..97902322hg19UCSC Ensembl
Cytoband3q11.2
Allele length
AssemblyAllele length
hg3856636
hg1956636
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2725671, esv2725669
SamplesSSM059, SSM036, SSM083, SSM071, SSM027, SSM075, SSM011, SSM079, SSM038, SSM097, SSM009, SSM073, SSM074, SSM002, SSM058, SSM092, SSM021, SSM069, SSM029, SSM062, SSM026, SSM017, SSM035, SSM094, SSM032, SSM001, SSM033, SSM066, SSM006, SSM085, SSM072, SSM020, SSM007, SSM078, SSM016, SSM053, SSM080, SSM076, SSM022, SSM010, SSM091, SSM055, SSM025, SSM004, SSM043
Known GenesOR5H1, OR5H14, OR5H15
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv776e201
Frequency
Sample Size96
Observed Gain0
Observed Loss45
Observed Complex0
Frequencyn/a


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