A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv68n27



Internal ID20132326
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:14913179..15018884hg38UCSC Ensembl
chr10:14955178..15060883hg19UCSC Ensembl
chr10:14995184..15100889hg18UCSC Ensembl
chr10:14995184..15100889hg17UCSC Ensembl
Cytoband10p13
Allele length
AssemblyAllele length
hg38105706
hg19105706
hg18105706
hg17105706
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv466744, nsv466745
Samples1782681109_A, 1780862043_A
Known GenesDCLRE1C, MEIG1
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv68n27
Frequency
Sample Size1557
Observed Gain2
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer