A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv662e201



Internal ID22760020
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr20:61272966..61274465hg38UCSC Ensembl
chr20:59848022..59849521hg19UCSC Ensembl
Cytoband20q13.33
Allele length
AssemblyAllele length
hg381500
hg191500
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2722690, esv2722686
SamplesSSM071, SSM027, SSM024, SSM011, SSM064, SSM065, SSM087, SSM039, SSM073, SSM093, SSM050, SSM074, SSM041, SSM028, SSM084, SSM021, SSM047, SSM061, SSM029, SSM096, SSM062, SSM089, SSM017, SSM019, SSM094, SSM003, SSM031, SSM014, SSM033, SSM066, SSM081, SSM020, SSM007, SSM015, SSM078, SSM053, SSM080, SSM076, SSM022, SSM010, SSM091, SSM095, SSM025, SSM043, SSM098
Known GenesCDH4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv662e201
Frequency
Sample Size96
Observed Gain0
Observed Loss45
Observed Complex0
Frequencyn/a


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