A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv629n140



Internal ID22811566
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:58003889..58004198hg38UCSC Ensembl
chr18:55671121..55671430hg19UCSC Ensembl
Cytoband18q21.31
Allele length
AssemblyAllele length
hg38310
hg19310
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv3065176, nsv3062984
SamplesCHM1, NA12878
Known Genes
MethodSequencing
AnalysisCombines the NGS (e.g., Illumina) and SMS (e.g., Pacbio) for detecting large and small SVs (parameters the same as commit eee31f6 of https://bitbucket.org/xianfan/hybridassemblysv)
Platform
Comments
ReferenceFan_et_al_2017
Pubmed ID28104618
Accession Number(s)dgv629n140
Frequency
Sample Size2
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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