A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv61e201



Internal ID22759419
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:247327446..247328587hg38UCSC Ensembl
chr1:247490748..247491889hg19UCSC Ensembl
Cytoband1q44
Allele length
AssemblyAllele length
hg381142
hg191142
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2741377, esv2727696
SamplesSSM036, SSM008, SSM071, SSM064, SSM087, SSM038, SSM073, SSM042, SSM041, SSM057, SSM023, SSM058, SSM028, SSM092, SSM090, SSM021, SSM047, SSM069, SSM061, SSM029, SSM019, SSM067, SSM044, SSM001, SSM033, SSM068, SSM007, SSM015, SSM053, SSM077, SSM022, SSM010, SSM091, SSM055, SSM070, SSM095, SSM043, SSM052, SSM012
Known GenesZNF496
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv61e201
Frequency
Sample Size96
Observed Gain0
Observed Loss39
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer