A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv61e199



Internal ID20123363
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:109680023..109703770hg38UCSC Ensembl
chr1:110222645..110246392hg19UCSC Ensembl
Cytoband1p13.3
Allele length
AssemblyAllele length
hg3823748
hg1923748
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2672266, esv2676246, esv2666328
SamplesNA20588, NA18502, HG00189, HG00650, HG00442, NA19058, NA20529, HG00608, NA18947, NA19664, NA19399, NA12414, NA12843, NA11920, NA11931, NA18999, NA20512, NA18504, NA19684, NA19377, HG01518, HG01461, NA18633, NA20806, HG00337, NA12813, NA19446, HG00138, NA19171, NA19379, HG00589, HG00122, NA19678, NA20795, NA18558, HG01492, NA18960, NA18618, NA18574, NA07048, NA11918, NA18582, NA20768, HG01083, HG01365, NA19384, HG00537, HG00311, NA19079, NA18949, HG00158, HG00512, HG00281, HG00139, NA20759, HG00335, NA20775, HG01519, NA18985, HG00323, HG01550, NA20515, NA19789, HG00137, NA12777, NA18951, NA18605, NA20535, NA12489, HG00731, NA18538, HG00266, NA19070, NA19056, HG01095, HG00657, NA20810, NA20760, NA19717, NA19663, HG00344, NA19081, HG01498, NA12718, NA20519, NA18572, NA18948, NA18981, NA19064, NA18548, HG01047, HG01102, HG00690, HG00404, NA12829, NA11893, HG00331, NA19750, NA19453, NA18532, NA06989, NA19059, HG01334, NA19452, NA19682, NA18523, HG00463, NA12778, NA19395, HG00126, NA18593, HG01107, NA19729, HG00611, NA19652, NA19440, HG00336, NA19434, NA18564, NA18628, HG00580, NA19331, NA20520, NA19010, HG01174, NA19470, NA19428, HG00116, NA19083, NA18943, NA19360, NA12763, HG00662, NA18615, NA19328, HG00614, HG00513, HG00478, NA19785, NA18631, NA19223, HG00267, NA18609, NA19102, HG00112, NA19770, NA20826, HG00377, HG00274, HG00595, NA18989, NA19129, HG00628, NA18612, NA19074, HG01437, HG00581, NA11832, NA20772, HG00593, HG00626, HG00096, HG01060, HG00114, HG01441, NA19648, HG00592, NA19055, NA19397, NA18924, NA11995, NA18592, HG01359, HG01052, NA18980, HG00100, NA18561, NA18507, HG01188, NA11933, NA18599, HG01389, HG01374, HG00306, NA20813, NA18603, NA12045, HG00699, NA12004, NA12058, NA20808, HG00150, NA20507, NA19190, NA18526, NA12413, NA12341, NA19068, HG01250, NA19746, NA19660, NA19076, HG00251, NA19728, NA18595, HG00702, HG00689, NA19723, HG00330, NA20769, HG00634, NA19131, HG00736, HG00610, NA19197, HG01354, NA20540, NA12287, HG00247, NA19054, NA20513, NA19681, HG00590, NA20541, NA12761, HG01134, NA12282, HG00277, NA19651, HG00120, HG00683, HG00106, HG01170, HG00236, HG00262, NA19719, NA19371, NA18560, NA18617, NA19471, HG01176, NA19087, NA12889, NA19002, NA19725, HG00637, HG00338, NA12828, HG00178, NA18908, HG00530, HG00419, NA18638, NA12748, HG00464, HG00108, NA20818, NA19007, HG00543, HG01136, HG00188, HG00149, HG00560, NA19247, NA18613, HG00629, NA19657, HG00176, NA19082, NA20524, HG01384, NA12342, NA19077, HG00428, NA19462, NA20809, NA20536, NA19391, HG00475, HG00584, HG00500, NA19788, NA18910, NA18976, NA20770, NA19776, NA19000, NA19655, HG01197, NA18499, HG01383, HG01182, NA18853, NA19225, NA20828, NA19756, HG00141, NA18536, NA20542, NA19685, NA19401, NA20801, HG00119, NA18535, NA11881, NA18952, NA18543, NA18559, NA19749, HG00565, NA18950, HG00375, NA19732, HG01253, HG00136, HG00638, HG00607, NA20504, HG00319, HG01108, HG00256, HG00125, NA19759, NA19376, HG00707, HG00672, HG00578, NA19248, NA19438, NA20582, NA19472, HG00329, HG00174, NA20807, HG00343, NA18552, HG00372, HG00252, HG01377, NA07056, NA18505, NA19004, HG00345, HG01097, NA19153, NA20509, NA19394, NA12383, HG00542, NA12717, NA12842, HG00143, HG01462, NA20766, NA12286, NA20508, HG00671, NA19204, NA18508, NA10851, HG00559, NA12273, NA20783, NA18565, NA20514, HG01066, HG00315, NA20816, NA20752, NA20802, HG00244, HG00181, NA19359, NA19355, NA12340, HG00737, HG00115, NA18616, HG00449, NA20517, HG00654, NA19443, HG01051, HG00261, NA20771, NA18510, NA12399, NA18602, HG01522, HG00693, NA18988, NA18627, HG00271, NA20814, NA07346, HG00641, NA19373, NA18940, NA19319, HG01351, NA20774, HG01168, NA18567, NA19062, NA07347, NA19457, NA18571, HG00334, HG00185, NA11930, NA20539, NA12275, HG01069, HG01080, NA20518, HG00148, NA12156, HG00156, HG00325, HG00232, NA12044, NA11994, HG00534, NA19207, HG00705, NA19722, HG00160, NA18990, HG01198, HG01048, HG00253, NA20753, HG01124, HG00154, HG00443, HG00268, HG01171, HG00282, NA19403, HG00557, NA18933, HG00732, HG00368, HG00556, HG00583, HG00263, HG00275, NA18579, HG01149, NA18534, HG00239, HG00740, NA20525, NA19654, HG00324, HG00284, NA18573, NA19461, NA11919, HG00651, HG00250, NA18626, HG00531, HG00479, HG00140, HG01497, NA19761, NA18555, HG00152, HG00146, HG00704, NA12144, NA19469, HG00246, NA18570, HG01075, NA19012, NA12043, NA18953, HG01148, NA19375, NA19003, HG00155, HG00254, NA19390, HG00265, HG00625, NA19747, HG00353, NA19072, NA12272, HG00734, HG01357, NA20790, NA20530, NA20527, HG00473, NA20778, HG00237, NA19679, NA19324, HG01113, NA20544, HG01137, NA19783, HG00418, NA18610, HG01489, HG00620, HG00339, NA06994, HG00259, HG00342, NA19716, NA19093, NA20510, NA18636, HG00310, HG00280, NA11843, NA20758, NA19116, NA19080, NA19780, NA18983, NA20502, NA11892, NA19316, NA19312, HG01125, HG00171, NA18968, NA12006, NA19463, NA20585, NA19063, NA12154, NA20754, NA19346, NA19676, NA18620, HG01516, HG00403, NA11830, HG01521, HG01098, HG01356, NA20543, HG00536, HG00231, HG00249, HG00361, HG00524, HG00187, NA19332, NA20531, NA20532, NA18917, HG00640, HG00318, NA18486, NA20805, NA19777, HG01456, HG00566, NA18606, HG00179, NA18870, NA12155, NA07357, HG01140, HG00327, NA18967, NA19374, NA19396, NA18944, HG01070, HG00501, NA19382, NA19762, NA19448, HG01488, HG00448, NA20586, NA19119, NA18982, NA11992, HG00346, NA19771, NA19088, HG00270, NA18964, NA18611, NA19404, HG01455, HG01067, NA19383, NA06984, NA18977, HG01495, HG01072, NA19731, NA19385, HG00422, NA19317, NA18986, HG01440, HG00309, HG00427, HG00159, NA20533, HG00264, NA11993, HG00260, NA18614, NA11831, HG01353, HG00313, HG00133, HG01183, HG01187, NA20505, NA12003, NA19152, HG00190, HG00653, HG00577, NA18956, HG00701, HG01515, NA19236, NA18516, HG00436, HG00320, HG00533, NA18637, NA20506, NA18630, HG00619, HG00708, HG00635, HG01390, HG01073, HG00273, NA19774, NA19449, NA20538, NA12249, HG00117, HG00613, HG00525, HG00321, HG00157, NA12827, NA19257, HG00276, NA18634, NA20534, NA19675, NA18945, HG01204, NA18546, NA18608, HG00124, NA20522, NA12716, NA18909, HG01190, HG00285, NA19321, NA18961, HG00366, NA19473, HG00357, NA19435, NA18941, NA20804, HG00278, NA19773, NA20785, NA19334, HG01494, NA20516, NA20797, NA07037, NA19085, NA06986, HG00269, NA19398, HG00111, HG01491, NA19060, HG00421, HG01254, HG01055, HG00123, HG00698, HG00131, NA19213, NA20528, HG01251, NA19661, HG01378, NA19755, HG01082, NA19758, NA18511, NA18522, HG00554, HG00180, NA18622, HG01061, NA18562, NA12776, NA18965
Known GenesGSTM1, GSTM2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)dgv61e199
Frequency
Sample Size1151
Observed Gain0
Observed Loss715
Observed Complex0
Frequencyn/a


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