A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv6153n223



Internal ID22809121
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:32527208..37403160hg38UCSC Ensembl
chr6:32494985..37370936hg19UCSC Ensembl
Cytoband6p21.2
Allele length
AssemblyAllele length
hg384875953
hg194875952
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv6565343, nsv6556866, nsv6570358, nsv6562119
Samples
Known GenesANKS1A, ARMC12, B3GALT4, BAK1, BRD2, BRPF3, C6orf1, C6orf106, C6orf222, C6orf89, CDKN1A, CLPS, CLPSL1, CLPSL2, COL11A2, CPNE5, CUTA, DAXX, DEF6, ETV7, FANCE, FGD2, FKBP5, GGNBP1, GRM4, HCG25, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1, HLA-DPB2, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRB1, HLA-DRB5, HLA-DRB6, HMGA1, HSD17B8, IP6K3, ITPR3, KCTD20, KIFC1, LEMD2, LHFPL5, LINC00336, LINC01016, LOC100294145, LOC285847, MAPK13, MAPK14, MIR1275, MIR219-1, MIR3925, MIR5004, MIR5690, MIR6834, MIR6835, MIR6873, MIR7111, MIR7159, MLN, MTCH1, NUDT3, PACSIN1, PFDN6, PHF1, PI16, PIM1, PNPLA1, PPARD, PPIL1, PSMB8, PSMB9, PXT1, RAB44, RGL2, RING1, RNF8, RPL10A, RPS10, RPS10-NUDT3, RPS18, RXRB, SCUBE3, SLC26A8, SLC39A7, SNRPC, SPDEF, SRPK1, SRSF3, STK38, SYNGAP1, TAF11, TAP1, TAP2, TAPBP, TAPSAR1, TBC1D22B, TCP11, TEAD3, TMEM217, TULP1, UHRF1BP1, UQCC2, VPS52, WDR46, ZBTB22, ZBTB9, ZNF76
MethodSequencing
Analysis
Platform
Comments
ReferenceSedlazeck_et_al_2020
Pubmed ID99999999
Accession Number(s)dgv6153n223
Frequency
Sample Size19652
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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