A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv5962n100



Internal ID20157578
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:52758309..52801607hg38UCSC Ensembl
chr6:52623107..52666405hg19UCSC Ensembl
chr6:52731066..52774364hg18UCSC Ensembl
Cytoband6p12.1
Allele length
AssemblyAllele length
hg3843299
hg1943299
hg1843299
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1015920, nsv1028720, nsv1031476, nsv1018027, nsv1023701, nsv1022580
Samples
Known GenesGSTA1, GSTA2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv5962n100
Frequency
Sample Size29084
Observed Gain0
Observed Loss12
Observed Complex0
Frequencyn/a


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