A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv5949n100



Internal ID22792036
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:32480352..32562509hg38UCSC Ensembl
chr6:32448129..32530286hg19UCSC Ensembl
chr6:32556107..32638264hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3882158
hg1982158
hg1882158
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1027910, nsv1021358, nsv1016015, nsv1018370, nsv1019767, nsv1018043, nsv1029001, nsv1019273, nsv1034363, nsv1023173
Samples
Known GenesHLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv5949n100
Frequency
Sample Size11257
Observed Gain264
Observed Loss38
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer