A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv5944n100



Internal ID20157560
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:31411996..31498018hg38UCSC Ensembl
chr6:31379773..31465795hg19UCSC Ensembl
chr6:31487752..31573774hg18UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3886023
hg1986023
hg1886023
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1016660, nsv1021331, nsv1034720, nsv1022089, nsv1025876, nsv1034093
Samples
Known GenesHCG26, HCP5, MICA
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv5944n100
Frequency
Sample Size29084
Observed Gain0
Observed Loss9
Observed Complex0
Frequencyn/a


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