A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv5354n100



Internal ID20156970
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:105540533..105580255hg38UCSC Ensembl
chr4:106461690..106501412hg19UCSC Ensembl
chr4:106681139..106720861hg18UCSC Ensembl
Cytoband4q24
Allele length
AssemblyAllele length
hg3839723
hg1939723
hg1839723
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1013019, nsv1005011
Samples
Known GenesARHGEF38, ARHGEF38-IT1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv5354n100
Frequency
Sample Size29084
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer