| Internal ID | 22767760 |
| Landmark | |
| Location Information | |
| Cytoband | 2p24.1 |
| Allele length | | Assembly | Allele length | | hg38 | 830948 | | hg19 | 830948 | | hg18 | 830948 |
|
| Variant Type | CNV gain |
| Copy Number | |
| Allele State | |
| Allele Origin | |
| Probe Count | |
| Validation Flag | |
| Merged Status | M |
| Merged Variants | |
| Supporting Variants | nsv819680, nsv819524, nsv820011, nsv820147 |
| Samples | AK1 |
| Known Genes | |
| Method | Oligo aCGH
SNP array |
| Analysis | Normalized bead intensity data and genotype calls were obtained with Illumina BeadStudio 3.1 software. Copy number variants (CNVs) were detected on the basis of deflected log R ratios.
The array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls. |
| Platform | GPL6985
GPL8887
GSE19651 |
| Comments | |
| Reference | Kim_et_al_2009 |
| Pubmed ID | 19587683 |
| Accession Number(s) | dgv4n43
|
| Frequency | | Sample Size | 2 | | Observed Gain | 1 | | Observed Loss | 0 | | Observed Complex | 0 | | Frequency | n/a |
|
