A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv4n29



Internal ID20133221
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:3086643..3256571hg38UCSC Ensembl
chr17:2989937..3159865hg19UCSC Ensembl
chr17:2936687..3106615hg18UCSC Ensembl
chr17:3196528..3366456hg16UCSC Ensembl
Cytoband17p13.3
Allele length
AssemblyAllele length
hg38169929
hg19169929
hg18169929
hg16169929
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv469601, nsv469609, nsv469600
Samples
Known GenesOR1A1, OR1A2, OR1D2, OR1D4, OR1G1
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)dgv4n29
Frequency
Sample Size265
Observed Gain0
Observed Loss12
Observed Complex0
Frequencyn/a


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