A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv4899n152



Internal ID22820602
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:172315250..172321384hg38UCSC Ensembl
chr2:173179978..173186112hg19UCSC Ensembl
Cytoband2q31.1
Allele length
AssemblyAllele length
hg386135
hg196135
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv3282965, nsv3280394, nsv3206551
SamplesHG00512, NA19238, HG00731, NA19240, HG00733, HG00514
Known Genes
MethodMerging
Sequencing
AnalysisMultiple analysis algorthms
PhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformIllumina HiSeq
See merged experiments
Comments
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)dgv4899n152
Frequency
Sample Size9
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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