Variant DetailsVariant: dgv473n27Internal ID | 20132731 | Landmark | | Location Information | | Cytoband | 2q13 | Allele length | Assembly | Allele length | hg38 | 125288 | hg19 | 125288 | hg18 | 125288 | hg17 | 125288 |
| Variant Type | CNV gain | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nsv458918, nsv458840, nsv458907, nsv458951, nsv458818, nsv458862, nsv458873, nsv458885, nsv458807, nsv458929, nsv458940, nsv458851, nsv458896, nsv458962 | Samples | HGDP00665, HGDP01308, NINDS_37, HGDP00757, HGDP01271, NINDS_271, HGDP00556, HGDP01261, HGDP00234, HGDP01027, HGDP00594, NINDS_236, 1782681316_A, 1780862390_A | Known Genes | LINC00116, MALL, NPHP1 | Method | SNP array | Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. | Platform | Not reported | Comments | | Reference | Itsara_et_al_2009 | Pubmed ID | 19166990 | Accession Number(s) | dgv473n27
| Frequency | Sample Size | 1557 | Observed Gain | 14 | Observed Loss | 0 | Observed Complex | 0 | Frequency | n/a |
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