A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv440e201



Internal ID22759798
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:82764821..82765105hg38UCSC Ensembl
chr17:80722697..80722981hg19UCSC Ensembl
Cytoband17q25.3
Allele length
AssemblyAllele length
hg38285
hg19285
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2716532, esv2716535
SamplesSSM027, SSM065, SSM087, SSM074, SSM088, SSM023, SSM096, SSM089, SSM019, SSM035, SSM032, SSM003, SSM078, SSM016, SSM005, SSM076, SSM091, SSM099
Known GenesTBCD
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv440e201
Frequency
Sample Size96
Observed Gain0
Observed Loss18
Observed Complex0
Frequencyn/a


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