A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv3n29



Internal ID18991972
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:21590297..21772388hg38UCSC Ensembl
chr16:21601618..21783709hg19UCSC Ensembl
chr16:21509119..21691210hg18UCSC Ensembl
chr16:21568171..21750262hg16UCSC Ensembl
Cytoband16p12.2
Allele length
AssemblyAllele length
hg38182092
hg19182092
hg18182092
hg16182092
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv469634, nsv469872
Samples
Known GenesIGSF6, METTL9, OTOA
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)dgv3n29
Frequency
Sample Size265
Observed Gain0
Observed Loss13
Observed Complex0
Frequencyn/a


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