A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv3899n100



Internal ID22789986
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:87146758..87747090hg38UCSC Ensembl
chr2:87373881..88046609hg19UCSC Ensembl
chr2:87227392..87827724hg18UCSC Ensembl
Cytoband2p11.2
Allele length
AssemblyAllele length
hg38600333
hg19672729
hg18600333
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1007434, nsv1005543, nsv1008818, nsv999869, nsv998080, nsv1008740, nsv1011371, nsv1009740, nsv1006582, nsv1004687, nsv1004165, nsv1014211, nsv1004374, nsv1000886, nsv1013764, nsv1000425
Samples
Known GenesLINC00152, MIR4435-1, MIR4435-2, MIR4771-1, MIR4771-2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv3899n100
Frequency
Sample Size11257
Observed Gain0
Observed Loss17
Observed Complex0
Frequencyn/a


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