A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv3892n100



Internal ID22789979
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:87094919..87725136hg38UCSC Ensembl
chr2:87322042..88024655hg19UCSC Ensembl
chr2:87175553..87805770hg18UCSC Ensembl
Cytoband2p11.2
Allele length
AssemblyAllele length
hg38630218
hg19702614
hg18630218
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv999020, nsv1009281, nsv1001727, nsv1012723, nsv1007268, nsv1013457, nsv1010548, nsv1010646, nsv1009103, nsv1006179, nsv1007588
Samples
Known GenesLINC00152, MIR4435-1, MIR4435-2, MIR4771-1, MIR4771-2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv3892n100
Frequency
Sample Size11257
Observed Gain109
Observed Loss46
Observed Complex0
Frequencyn/a


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