A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv3889n100



Internal ID20155505
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:87051761..87919212hg38UCSC Ensembl
chr2:87278884..88218731hg19UCSC Ensembl
chr2:87132395..87999846hg18UCSC Ensembl
Cytoband2p11.2
Allele length
AssemblyAllele length
hg38867452
hg19939848
hg18867452
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv1000033, nsv1009756, nsv1011929, nsv1002598
Samples
Known GenesLINC00152, LOC285074, MIR4435-1, MIR4435-2, MIR4771-1, MIR4771-2, PLGLB1, PLGLB2, RGPD1, RGPD2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)dgv3889n100
Frequency
Sample Size29084
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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