A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv33e194



Internal ID20123176
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:131481983..131482363hg38UCSC Ensembl
chr6:131803123..131803503hg19UCSC Ensembl
chr6:131844816..131845196hg18UCSC Ensembl
Cytoband6q23.2
Allele length
AssemblyAllele length
hg38381
hg19381
hg18381
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2385250, esv2297470
SamplesNA18507
Known Genes
MethodSequencing
AnalysisHierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.
PlatformNot specified
Comments
ReferenceBentley_et_al_2008
Pubmed ID18987734
Accession Number(s)dgv33e194
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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