A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv327n27



Internal ID22767056
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:93191753..93221511hg38UCSC Ensembl
chr15:93734982..93764740hg19UCSC Ensembl
chr15:91535986..91565744hg18UCSC Ensembl
chr15:91535986..91565744hg17UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg3829759
hg1929759
hg1829759
hg1729759
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv457253, nsv457251, nsv457255
SamplesHGDP00955, HGDP00956, HGDP01220
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv327n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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