A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv324n27



Internal ID22767053
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:87245241..87320484hg38UCSC Ensembl
chr15:87788472..87863715hg19UCSC Ensembl
chr15:85589476..85664719hg18UCSC Ensembl
chr15:85589476..85664719hg17UCSC Ensembl
Cytoband15q25.3
Allele length
AssemblyAllele length
hg3875244
hg1975244
hg1875244
hg1775244
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv457232, nsv457234, nsv457233
SamplesNINDS_260, NINDS_186, NINDS_258
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv324n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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