A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv320n27



Internal ID22767049
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:70183361..70198311hg38UCSC Ensembl
chr15:70475700..70490650hg19UCSC Ensembl
chr15:68262754..68277704hg18UCSC Ensembl
chr15:68262754..68277704hg17UCSC Ensembl
Cytoband15q23
Allele length
AssemblyAllele length
hg3814951
hg1914951
hg1814951
hg1714951
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnsv457191, nsv457190
SamplesHGDP01163, HGDP01153
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)dgv320n27
Frequency
Sample Size1557
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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